SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900560
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr4:169604809-169627740
Size: 22931
Super-enhancer rank 560
Number of SE elements: 8
ChIP density(Case|Control): 26441.7361|2887.0129
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NEK1 ;
ROSE Overlap CLCN3 ; NEK1 ;
ROSE Proximal CLCN3 ; NEK1 ;
ROSE Closest NEK1 ;
Lasso C4orf27 ;
PreSTIGE CLCN3 ; NEK1 ;
ABC ;
BETA CLCN3 ; NEK1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900560 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers