SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900556
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr1:36134715-36163276
Size: 28561
Super-enhancer rank 556
Number of SE elements: 4
ChIP density(Case|Control): 28343.9364|4718.2772
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TRAPPC3 ;
ROSE Overlap MAP7D1 ; TRAPPC3 ;
ROSE Proximal ADPRHL2 ; COL8A2 ;
ROSE Closest TRAPPC3 ;
Lasso ADPRHL2 ; EVA1B ; LS10 ; RP11-268J15.5 ; SH3D21 ; STK40 ; THRAP3 ;
PreSTIGE ;
ABC ;
BETA THRAP3 ; TRAPPC3 ; MAP7D1 ; TEKT2 ; COL8A2 ; ADPRHL2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900556 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers