SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900551
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr19:38836581-38853385
Size: 16804
Super-enhancer rank 551
Number of SE elements: 4
ChIP density(Case|Control): 25725.2436|1866.9244
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HNRNPL ;
ROSE Overlap HNRNPL ;
ROSE Proximal ECH1 ; SIRT2 ; NFKBIB ; LGALS7B ; RINL ; LGALS4 ;
ROSE Closest HNRNPL ;
Lasso NFKBIB ; RINL ; SIRT2 ;
PreSTIGE ;
ABC ;
BETA NFKBIB ; LGALS4 ; RINL ; SIRT2 ; ECH1 ; LGALS7B ; CCER2 ; HNRNPL ; LGALS7 ; SARS2 ; MRPS12 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900551 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers