SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900548
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr12:119664373-119673778
Size: 9405
Super-enhancer rank 548
Number of SE elements: 3
ChIP density(Case|Control): 25429.239|1485.0495
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PRKAB1 ;
ROSE Overlap PRKAB1 ;
ROSE Proximal MIR1178 ;
ROSE Closest PRKAB1 ;
Lasso ;
PreSTIGE PRKAB1 ;
ABC ;
BETA TMEM233 ; MIR1178 ; PRKAB1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900548 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers