SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900545
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr1:26274084-26289902
Size: 15818
Super-enhancer rank 545
Number of SE elements: 4
ChIP density(Case|Control): 27282.8864|3228.4538
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SH3BGRL3 ;
ROSE Overlap UBXN11 ; SH3BGRL3 ; CCDC21 ;
ROSE Proximal CD52 ; UBXN11 ;
ROSE Closest SH3BGRL3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LOC101928303 ; UBXN11 ; CEP85 ; SH3BGRL3 ; CATSPER4 ; ZNF683 ; CD52 ; AIM1L ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900545 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers