SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900542
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr1:15541830-15545054
Size: 3224
Super-enhancer rank 542
Number of SE elements: 1
ChIP density(Case|Control): 25049.5128|866.9336
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DNAJC16 ;
ROSE Overlap DNAJC16 ;
ROSE Proximal CASP9 ; AGMAT ;
ROSE Closest DNAJC16 ;
Lasso CASP9 ; DDI2 ; DNAJC16 ;
PreSTIGE CASP9 ;
ABC ;
BETA CASP9 ; AGMAT ; DNAJC16 ; DDI2 ; CELA2A ; CELA2B ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900542 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers