SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900541
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr12:116551248-116562416
Size: 11168
Super-enhancer rank 541
Number of SE elements: 3
ChIP density(Case|Control): 25655.1296|1454.0736
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MAP1LC3B2 ;
ROSE Overlap MAP1LC3B2 ;
ROSE Proximal NCRNA00173 ;
ROSE Closest MAP1LC3B2 ;
Lasso ;
PreSTIGE LINC00173 ; ED13L ;
ABC ;
BETA MAP1LC3B2 ; LINC00173 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900541 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers