SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900539
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr19:1268242-1277017
Size: 8775
Super-enhancer rank 539
Number of SE elements: 1
ChIP density(Case|Control): 25782.705|1501.4025
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: C19ORF23 ;
ROSE Overlap C19orf23 ; C19orf24 ; CIRBP ;
ROSE Proximal ATP5D ; C19orf26 ; MIDN ; EFNA2 ;
ROSE Closest C19orf23 ;
Lasso ;
PreSTIGE ;
ABC CIRBP ; C19orf24 ; CIRBP-AS1 ;
BETA MUM1 ; C19orf26 ; CIRBP ; ATP5D ; EFNA2 ; CIRBP-AS1 ; C19orf24 ; STK11 ; SBNO2 ; MIDN ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900539 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers