SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900537
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr16:23819998-23848422
Size: 28424
Super-enhancer rank 537
Number of SE elements: 7
ChIP density(Case|Control): 28148.2872|3751.968
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PRKCB ;
ROSE Overlap PRKCB ;
ROSE Proximal ;
ROSE Closest PRKCB ;
Lasso PRKCB ;
PreSTIGE PRKCB ;
ABC PRKCB ; CHP2 ; LINC01567 ; PLK1 ; DCTN5 ; TNRC6A ; PALB2 ;
BETA PRKCB ; CHP2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900537 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers