SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900531
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr1:28641891-28645180
Size: 3289
Super-enhancer rank 531
Number of SE elements: 1
ChIP density(Case|Control): 25434.1659|922.8934
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TAF12 ;
ROSE Overlap TAF12 ;
ROSE Proximal TAF12 ; RAB42 ; RNU11 ; GMEB1 ;
ROSE Closest TAF12 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA RAB42 ; SNORA16A ; YTHDF2 ; TAF12 ; SNHG12 ; SNORD99 ; TRNAU1AP ; GMEB1 ; SNORA61 ; RNU11 ; SNORA44 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900531 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers