SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003900524
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr2:96866739-96894666
Size: 27927
Super-enhancer rank 524
Number of SE elements: 6
ChIP density(Case|Control): 28295.6364|3532.7655
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SEMA4C ;
ROSE Overlap FAM178B ; SEMA4C ;
ROSE Proximal ANKRD39 ; ANKRD23 ;
ROSE Closest SEMA4C ;
Lasso ;
PreSTIGE ;
ABC STARD7 ; STARD7-AS1 ; FAHD2CP ; TMEM127 ; CIAO1 ;
BETA CNNM3 ; ANKRD39 ; FAM178B ; SEMA4C ; MIR3127 ; LOC101927053 ; ANKRD23 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900524 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers