SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900523
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr11:808263-812779
Size: 4516
Super-enhancer rank 523
Number of SE elements: 1
ChIP density(Case|Control): 25631.9128|803.3964
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RPLP2 ;
ROSE Overlap RPLP2 ; SNORA52 ;
ROSE Proximal EFCAB4A ; POLR2L ; LRDD ; CD151 ; PNPLA2 ; TSPAN4 ; SLC25A22 ; CEND1 ; PDDC1 ;
ROSE Closest RPLP2 ;
Lasso ;
PreSTIGE ;
ABC PNPLA2 ; RPLP2 ; PIDD1 ; PANO1 ; SLC25A22 ; CD151 ; CRACR2B ; CEND1 ;
BETA PNPLA2 ; LOC171391 ; TSPAN4 ; CD151 ; CEND1 ; PIDD1 ; SLC25A22 ; TALDO1 ; PANO1 ; SNORA52 ; POLR2L ; RPLP2 ; CRACR2B ; PDDC1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900523 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers