SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003900522
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr6:28866217-28898856
Size: 32639
Super-enhancer rank 522
Number of SE elements: 6
ChIP density(Case|Control): 30001.7688|5160.2259
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC401242 ;
ROSE Overlap ;
ROSE Proximal TRIM27 ; LOC401242 ;
ROSE Closest LOC401242 ;
Lasso C6orf100 ; HIST1H2A ; HIST1H3J ; TRI27 ; ZNF311 ;
PreSTIGE TRI27 ;
ABC TRIM27 ;
BETA LOC401242 ; LINC01556 ; TRIM27 ; HCG14 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900522 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers