SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900516
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr19:48321242-48334470
Size: 13228
Super-enhancer rank 516
Number of SE elements: 3
ChIP density(Case|Control): 26694.104|1640.272
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EMP3 ;
ROSE Overlap TMEM143 ; EMP3 ;
ROSE Proximal CCDC114 ; ZNF114 ; SYNGR4 ;
ROSE Closest EMP3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TMEM143 ; CARD8 ; CARD8-AS1 ; SYNGR4 ; ZNF114 ; CCDC114 ; GRIN2D ; KDELR1 ; EMP3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900516 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers