SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900511
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr19:45501315-45516721
Size: 15406
Super-enhancer rank 511
Number of SE elements: 3
ChIP density(Case|Control): 27304.0538|2018.186
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: VASP ;
ROSE Overlap PPM1N ; VASP ;
ROSE Proximal FOSB ; RTN2 ;
ROSE Closest VASP ;
Lasso ;
PreSTIGE PP1N ; RTN2 ; VASP ;
ABC ;
BETA ERCC1 ; GPR4 ; MIR6088 ; VASP ; FOSB ; PPM1N ; OPA3 ; RTN2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900511 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers