SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900509
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr22:20114151-20121060
Size: 6909
Super-enhancer rank 509
Number of SE elements: 1
ChIP density(Case|Control): 28180.4292|2874.144
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RANBP1 ;
ROSE Overlap TRMT2A ; RANBP1 ;
ROSE Proximal TRMT2A ; ZDHHC8 ; MIR3618 ; DGCR8 ; MIR1306 ;
ROSE Closest RANBP1 ;
Lasso ;
PreSTIGE ARVCF ; C22orf25 ; DGCR8 ; LOC150197 ; RANBP1 ; TRT2A ; ZDHHC8 ;
ABC ZDHHC8 ;
BETA DGCR8 ; MIR1306 ; MIR6816 ; RANBP1 ; LINC00896 ; MIR3618 ; TRMT2A ; TANGO2 ; ZDHHC8 ; LOC284865 ; LOC388849 ; MIR185 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900509 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers