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Super-enhancer search result
Super-enhancer detail
Super-enhancer overview
SE ID:
SE_01_003900493
Species:
Human
Data source:
ENCODE
Biosample type:
Cell line
Tissue type:
Haematopoietic and lymphoid tissue bone marrow
Biosample name:
K562
Genomic region:
chr12:98502682-98519669
Size:
16987
Super-enhancer rank
:
493
Number of SE elements:
3
ChIP density(Case|Control):
27848.4878|1951.8063
Genome browser:
Super-enhancer associated network
Super-enhancer annotation
Common SNP
eQTL
Risk SNP
TFBS conserved
CRISPR/Cas9 target site
DHS
Enhancer
Methylation-450K
TAD
Chromatin accessibility region
Methylation-WGBS
Chromatin interaction
1~5
5~10
10~MAX
Super-enhancer associated genes
Strategies/Algorithm
Gene name
The closest active:
TMPO
;
ROSE Overlap
TMPO
;
LOC100128191
;
ROSE Proximal
LOC121456
;
ROSE Closest
TMPO
;
Lasso
RP11-181C3.1
;
SLC25A3
;
TPO
;
PreSTIGE
LOC100128191
;
SNORA53
;
TPO
;
Network diagram of super-enhancer and associated genes
Expression of
SE_01_003900493
associated genes
Cell line (ENCODE)
Primary cell (ENCODE)
Normal tissue (GTEx)
Cell line (CCLE)
Cancer (TCGA)
TF Binding to Super-enhancer
TF Predicted by Motif
TF Identified by ChIP-seq
Super-enhancer element (H3K27ac)
1~5
5~10
10~MAX
GREAT
Download bed
Overlap with other super-enhancers