SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900493
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr12:98502682-98519669
Size: 16987
Super-enhancer rank 493
Number of SE elements: 3
ChIP density(Case|Control): 27848.4878|1951.8063
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TMPO ;
ROSE Overlap TMPO ; LOC100128191 ;
ROSE Proximal LOC121456 ;
ROSE Closest TMPO ;
Lasso RP11-181C3.1 ; SLC25A3 ; TPO ;
PreSTIGE LOC100128191 ; SNORA53 ; TPO ;
ABC ;
BETA SNORA53 ; SLC25A3 ; TMPO ; SLC9A7P1 ; TMPO-AS1 ; LOC643770 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900493 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers