SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900490
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr4:40237351-40240591
Size: 3240
Super-enhancer rank 490
Number of SE elements: 1
ChIP density(Case|Control): 26535.276|511.92
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RHOH ;
ROSE Overlap RHOH ;
ROSE Proximal ;
ROSE Closest RHOH ;
Lasso ;
PreSTIGE ;
ABC APBB2 ; CHRNA9 ; LOC101060498 ; RHOH ; SMIM14 ; UGDH-AS1 ; UGDH ; SLC30A9 ; LOC344967 ; LIAS ; RPL9 ; KLB ; N4BP2 ; UBE2K ; RBM47 ; RFC1 ; TMEM33 ; WDR19 ; TLR1 ; PDS5A ;
BETA RHOH ; LOC101060498 ; CHRNA9 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900490 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers