SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900488
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr19:47240147-47245692
Size: 5545
Super-enhancer rank 488
Number of SE elements: 1
ChIP density(Case|Control): 27358.4755|1294.203
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: BBC3 ;
ROSE Overlap ;
ROSE Proximal CCDC9 ; BBC3 ; MIR3191 ; MIR3190 ; PRR24 ;
ROSE Closest BBC3 ;
Lasso ;
PreSTIGE ;
ABC STRN4 ; FKRP ; PRKD2 ;
BETA BBC3 ; INAFM1 ; MIR3190 ; C5AR1 ; C5AR2 ; MIR3191 ; CCDC9 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900488 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers