SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900481
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr22:19418754-19433904
Size: 15150
Super-enhancer rank 481
Number of SE elements: 3
ChIP density(Case|Control): 32937.615|6659.94
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HIRA ;
ROSE Overlap HIRA ; MRPL40 ;
ROSE Proximal UFD1L ; CDC45 ; C22orf39 ;
ROSE Closest HIRA ;
Lasso ;
PreSTIGE C22orf39 ; CDC45 ; CLTCL1 ; HIRA ; RPL40 ; SLC25A1 ; UFD1L ;
ABC HIRA ; MRPL40 ; C22orf39 ;
BETA HIRA ; C22orf39 ; CDC45 ; UFD1L ; CLDN5 ; MRPL40 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900481 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers