SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900478
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr4:6908432-6918856
Size: 10424
Super-enhancer rank 478
Number of SE elements: 3
ChIP density(Case|Control): 27887.3272|1521.904
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TBC1D14 ;
ROSE Overlap TBC1D14 ;
ROSE Proximal ;
ROSE Closest TBC1D14 ;
Lasso ;
PreSTIGE ;
ABC TBC1D14 ; CPZ ; SH3TC1 ; ABLIM2 ; MRFAP1 ; MAN2B2 ; LOC285484 ; LOC105374366 ; LOC93622 ; S100P ; MRFAP1L1 ; BLOC1S4 ; AFAP1-AS1 ; FLJ36777 ; GRPEL1 ; TADA2B ; EVC ; CCDC96 ; JAKMIP1 ; KIAA0232 ;
BETA TBC1D14 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900478 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers