SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900462
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr3:37985714-37999065
Size: 13351
Super-enhancer rank 462
Number of SE elements: 3
ChIP density(Case|Control): 29696.6293|2492.6317
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: VILL ;
ROSE Overlap VILL ;
ROSE Proximal MIR26A1 ; PLCD1 ; DLEC1 ;
ROSE Closest VILL ;
Lasso ;
PreSTIGE PLCD1 ; VILL ;
ABC ;
BETA PLCD1 ; MIR26A1 ; VILL ; DLEC1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900462 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers