SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003900455
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr9:132978454-133005440
Size: 26986
Super-enhancer rank 455
Number of SE elements: 6
ChIP density(Case|Control): 31220.1034|3845.505
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GFI1B ;
ROSE Overlap GFI1B ;
ROSE Proximal TSC1 ; GFI1B ; GTF3C5 ;
ROSE Closest GFI1B ;
Lasso ;
PreSTIGE CEL ; GFI1B ; GTF3C5 ;
ABC ;
BETA GTF3C5 ; TSC1 ; GFI1B ; CEL ; MIR548AW ; MIR6877 ; CELP ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900455 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers