SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003900444
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr4:38661059-38675368
Size: 14309
Super-enhancer rank 444
Number of SE elements: 5
ChIP density(Case|Control): 30121.8759|2269.4074
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FLJ13197 ;
ROSE Overlap FLJ13197 ; KLF3 ;
ROSE Proximal ;
ROSE Closest FLJ13197 ;
Lasso ;
PreSTIGE ;
ABC LINC01258 ; KLF3 ; KLF3-AS1 ; TLR1 ; LOC100508631 ; RELL1 ; PGM2 ; TLR6 ; FAM114A1 ; WDR19 ; RFC1 ; KLB ;
BETA KLF3-AS1 ; KLF3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900444 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers