SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900443
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr6:33270881-33277854
Size: 6973
Super-enhancer rank 443
Number of SE elements: 1
ChIP density(Case|Control): 29300.546|1442.7137
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RPS18 ;
ROSE Overlap RPS18 ; B3GALT4 ; VPS52 ;
ROSE Proximal WDR46 ; PFDN6 ; ZBTB22 ; RGL2 ; TAPBP ; DAXX ;
ROSE Closest RPS18 ;
Lasso BRD2 ; CUTA ; HLA-DA ; HSD17B8 ; KIFC1 ; PHF1 ; RING1 ; RXRB ; SLC39A7 ; SYNGAP1 ; ZBTB9 ;
PreSTIGE DAXX ; HCG25 ; HSD17B8 ; PFDN6 ; RGL2 ; RPS18 ; RXRB ; SLC39A7 ; VPS52 ; WDR46 ;
ABC ;
BETA SLC39A7 ; RGL2 ; VPS52 ; TAPBP ; RPS18 ; ZBTB22 ; WDR46 ; MIR6873 ; COL11A2 ; RING1 ; PFDN6 ; RXRB ; DAXX ; MIR6834 ; HSD17B8 ; HCG25 ; MIR219A1 ; B3GALT4 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900443 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers