SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900442
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr6:32173596-32180693
Size: 7097
Super-enhancer rank 442
Number of SE elements: 1
ChIP density(Case|Control): 29853.5305|1985.7406
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: AGPAT1 ;
ROSE Overlap AGPAT1 ; RNF5 ; RNF5P1 ;
ROSE Proximal ATF6B ; FKBPL ; PPT2 ; EGFL8 ; PRRT1 ; NOTCH4 ; GPSM3 ; AGER ; PBX2 ; LOC100507547 ;
ROSE Closest AGPAT1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA NOTCH4 ; MIR6721 ; PPT2 ; PRRT1 ; TNXB ; AGER ; LOC100507547 ; PPT2-EGFL8 ; PBX2 ; FKBPL ; AGPAT1 ; RNF5 ; EGFL8 ; GPSM3 ; ATF6B ; MIR6833 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900442 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers