SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003900439
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr19:40267088-40287229
Size: 20141
Super-enhancer rank 439
Number of SE elements: 5
ChIP density(Case|Control): 30594.179|2628.4005
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR641 ;
ROSE Overlap AKT2 ; MIR641 ;
ROSE Proximal CNTD2 ; TTC9B ;
ROSE Closest MIR641 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA C19orf47 ; TTC9B ; MIR6796 ; CNTD2 ; PLD3 ; AKT2 ; MIR641 ; MAP3K10 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900439 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers