SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003900438
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr19:14355650-14402928
Size: 47278
Super-enhancer rank 438
Number of SE elements: 8
ChIP density(Case|Control): 32328.6964|4354.3038
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CD97 ;
ROSE Overlap CD97 ;
ROSE Proximal PKN1 ; DDX39 ;
ROSE Closest CD97 ;
Lasso CD97 ; DDX39A ; PKN1 ;
PreSTIGE CD97 ; DDX39A ; PKN1 ;
ABC ;
BETA CD97 ; PTGER1 ; DDX39A ; PKN1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900438 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers