SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900427
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr11:62853299-62858665
Size: 5366
Super-enhancer rank 427
Number of SE elements: 1
ChIP density(Case|Control): 29493.6824|1089.298
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC3A2 ;
ROSE Overlap SNORD26 ; SNORD30 ; SNHG1 ; SNORD27 ; SNORD28 ; SLC3A2 ; SNORD31 ; SNORD25 ; SNORD29 ;
ROSE Proximal SLC3A2 ; NXF1 ; STX5 ; SNORD22 ; WDR74 ;
ROSE Closest SLC3A2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SNORD27 ; SNORD31 ; SNHG1 ; SNORD26 ; TMEM179B ; CHRM1 ; SLC3A2 ; STX5 ; TMEM223 ; MIR6748 ; TAF6L ; SNORD29 ; NXF1 ; SNORD30 ; SNORD28 ; POLR2G ; RNU2-2P ; WDR74 ; SNORD22 ; SNORD25 ; MIR6514 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900427 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers