SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003900425
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr16:29784806-29810438
Size: 25632
Super-enhancer rank 425
Number of SE elements: 4
ChIP density(Case|Control): 31178.7648|2696.4864
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KIF22 ;
ROSE Overlap KIF22 ; MAZ ;
ROSE Proximal PRRT2 ; MVP ; C16orf53 ; ZG16 ; C16orf54 ;
ROSE Closest KIF22 ;
Lasso ;
PreSTIGE ;
ABC KIF22 ;
BETA C16orf54 ; PRRT2 ; MAZ ; MVP ; KIF22 ; CDIPT-AS1 ; CDIPT ; PAGR1 ; ZG16 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900425 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers