SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900423
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr19:13095516-13105168
Size: 9652
Super-enhancer rank 423
Number of SE elements: 2
ChIP density(Case|Control): 29822.7496|1185.2656
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LYL1 ;
ROSE Overlap TRMT1 ; NFIX ; LYL1 ;
ROSE Proximal IER2 ; NACC1 ; TRMT1 ; STX10 ;
ROSE Closest LYL1 ;
Lasso ;
PreSTIGE LYL1 ; STX10 ; TRT1 ;
ABC NFIX ;
BETA STX10 ; TRMT1 ; NFIX ; IER2 ; LYL1 ; NACC1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900423 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers