SEdb 2.0
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Super-enhancer overview

SE ID: SE_01_003900419
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr6:31833589-31838828
Size: 5239
Super-enhancer rank 419
Number of SE elements: 1
ChIP density(Case|Control): 30025.7568|1322.8475
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SNORD52;
ROSE Overlap SNORD52; C6orf48; SNORD48;
ROSE Proximal VARS; HSPA1L; C6orf48; NEU1; LSM2; HSPA1B; SLC44A4; HSPA1A;
ROSE Closest SNORD52;
Lasso ;
PreSTIGE C6orf48; CLIC1; HSPA1A; HSPA1B; HSPA1L; LS2; SH5; NEU1; SAPCD1; SLC44A4; VARS; VWA7; ZBTB12;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900419 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers