SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900415
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr6:34271788-34327893
Size: 56105
Super-enhancer rank 415
Number of SE elements: 11
ChIP density(Case|Control): 38437.5355|9509.7975
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: C6ORF1 ;
ROSE Overlap NUDT3 ;
ROSE Proximal HMGA1 ; C6orf1 ;
ROSE Closest C6orf1 ;
Lasso C6orf1 ; HGA1 ;
PreSTIGE C6orf1 ; HGA1 ; NUDT3 ; RPS10 ;
ABC ;
BETA NUDT3 ; HMGA1 ; C6orf1 ; MIR6835 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900415 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers