SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900406
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr19:19364337-19411214
Size: 46877
Super-enhancer rank 406
Number of SE elements: 12
ChIP density(Case|Control): 33765.5031|4631.4476
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GATAD2A ;
ROSE Overlap GATAD2A ;
ROSE Proximal MAU2 ; SUGP1 ;
ROSE Closest GATAD2A ;
Lasso GATAD2A ; AU2 ; SUGP1 ;
PreSTIGE ;
ABC ;
BETA MIR640 ; SUGP1 ; GATAD2A ; MAU2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900406 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers