SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900405
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr19:48872008-48876676
Size: 4668
Super-enhancer rank 405
Number of SE elements: 1
ChIP density(Case|Control): 30335.9316|1173.0684
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PPP1R15A ;
ROSE Overlap PPP1R15A ;
ROSE Proximal PLEKHA4 ; NUCB1 ; HSD17B14 ; TULP2 ;
ROSE Closest PPP1R15A ;
Lasso ;
PreSTIGE BCAT2 ; DHDH ; FTL ; NUCB1 ; PLEKHA4 ; PPP1R15A ; TULP2 ;
ABC ;
BETA PLEKHA4 ; BCAT2 ; DHDH ; BAX ; TULP2 ; PPP1R15A ; NUCB1-AS1 ; FTL ; NUCB1 ; HSD17B14 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900405 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers