SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900404
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr16:20739835-20768049
Size: 28214
Super-enhancer rank 404
Number of SE elements: 5
ChIP density(Case|Control): 32451.7428|3286.931
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ACSM3 ;
ROSE Overlap THUMPD1 ; ACSM3 ;
ROSE Proximal LOC81691 ; ACSM1 ; ERI2 ;
ROSE Closest ACSM3 ;
Lasso AC004381.6 ; ACS1 ; THUPD1 ;
PreSTIGE ACS1 ; ACS3 ; ERI2 ; LOC81691 ; THUPD1 ;
ABC THUMPD1 ; ERI2 ; LOC81691 ; ACSM3 ; ACSM1 ; DCUN1D3 ; LYRM1 ; TMEM159 ; DNAH3 ; C16orf62 ; IQCK ; KNOP1 ; GPRC5B ; CRYM ; CRYM-AS1 ; ANKS4B ;
BETA LOC81691 ; ACSM1 ; ACSM3 ; ERI2 ; THUMPD1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900404 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers