SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900399
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr1:52400454-52405885
Size: 5431
Super-enhancer rank 399
Number of SE elements: 1
ChIP density(Case|Control): 30465.1945|1079.1397
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ORC1 ;
ROSE Overlap PRPF38A ; ORC1 ;
ROSE Proximal CC2D1B ; ORC1 ;
ROSE Closest ORC1 ;
Lasso CC2D1B ; NRD1 ; ZCCHC11 ; ZYG11A ;
PreSTIGE ;
ABC ;
BETA ORC1 ; PRPF38A ; CC2D1B ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900399 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers