SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900398
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr1:154972129-154977023
Size: 4894
Super-enhancer rank 398
Number of SE elements: 1
ChIP density(Case|Control): 30532.6872|1118.7684
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CKS1B ;
ROSE Overlap CKS1B ; MIR4258 ; SHC1 ;
ROSE Proximal PYGO2 ; PBXIP1 ; FLAD1 ; ZBTB7B ; PMVK ; SHC1 ; LENEP ;
ROSE Closest CKS1B ;
Lasso ;
PreSTIGE ;
ABC DCST2 ; DCST1 ; ZBTB7B ; LENEP ; FLAD1 ; CKS1B ; SHC1 ; PYGO2 ; LOC101928120 ; DCST1-AS1 ; ADAM15 ; PBXIP1 ;
BETA ADAM15 ; FLAD1 ; SHC1 ; DCST1 ; LOC100505666 ; DCST2 ; CKS1B ; PYGO2 ; ZBTB7B ; PMVK ; MIR4258 ; EFNA4 ; LENEP ; PBXIP1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900398 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers