SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003900396
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr14:34545562-34562561
Size: 16999
Super-enhancer rank 396
Number of SE elements: 3
ChIP density(Case|Control): 31210.164|1772.9957
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EAPP ;
ROSE Overlap SNX6 ;
ROSE Proximal EAPP ;
ROSE Closest EAPP ;
Lasso EAPP ; EGLN3 ; SPTSSA ; SRP54 ;
PreSTIGE ;
ABC EGLN3 ;
BETA RNU1-28P ; SNX6 ; RNU1-3 ; SPTSSA ; RNU1-27P ; RNU1-1 ; RNU1-2 ; RNU1-4 ; RNVU1-18 ; EAPP ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900396 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers