SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003900395
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr6:2848684-2860114
Size: 11430
Super-enhancer rank 395
Number of SE elements: 2
ChIP density(Case|Control): 31601.664|2139.696
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SERPINB1 ;
ROSE Overlap MGC39372 ;
ROSE Proximal SERPINB1 ; SERPINB9 ;
ROSE Closest SERPINB1 ;
Lasso ;
PreSTIGE ;
ABC SERPINB1 ; SERPINB9P1 ; LOC101927730 ; SERPINB9 ; FAM50B ; BPHL ; LINC01600 ; RIPK1 ; MYLK4 ; WRNIP1 ; LOC101927759 ; HTATSF1P2 ; NQO2 ; LINC01011 ; SERPINB6 ; GMDS ; GMDS-AS1 ;
BETA SERPINB9P1 ; WRNIP1 ; SERPINB1 ; MIR4645 ; LOC101927730 ; SERPINB9 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900395 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers