SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900389
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr19:12883521-12888687
Size: 5166
Super-enhancer rank 389
Number of SE elements: 1
ChIP density(Case|Control): 30363.6816|731.5056
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KLF1 ;
ROSE Overlap KLF1 ;
ROSE Proximal SYCE2 ; GCDH ; RTBDN ; MAST1 ; FARSA ; CALR ; DNASE2 ;
ROSE Closest KLF1 ;
Lasso ;
PreSTIGE DAND5 ; GADD45GIP1 ; KLF1 ; AST1 ; RNASEH2A ; SYCE2 ;
ABC HOOK2 ; JUNB ;
BETA RTBDN ; GCDH ; GADD45GIP1 ; RNASEH2A ; MIR6794 ; DAND5 ; FARSA ; PRDX2 ; MIR5684 ; RAD23A ; MIR5695 ; MAST1 ; DNASE2 ; JUNB ; MIR6515 ; KLF1 ; CALR ; SYCE2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900389 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers