SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900388
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr1:228486137-228491396
Size: 5259
Super-enhancer rank 388
Number of SE elements: 1
ChIP density(Case|Control): 30610.5354|973.4409
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RNF187 ;
ROSE Overlap RNF187 ;
ROSE Proximal HIST3H2A ; HIST3H2BB ;
ROSE Closest RNF187 ;
Lasso HIST3H2A ; HIST3H2BB ; TRI11 ;
PreSTIGE HIST3H2A ; HIST3H2BB ; TRI11 ; TRI17 ;
ABC ;
BETA HIST3H3 ; HIST3H2A ; TRIM17 ; MIR6742 ; MIR4666A ; HIST3H2BB ; RNF187 ; TRIM11 ; BTNL10 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900388 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers