SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900385
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr20:56409424-56449020
Size: 39596
Super-enhancer rank 385
Number of SE elements: 10
ChIP density(Case|Control): 34135.7116|4434.752
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CASS4 ;
ROSE Overlap CASS4 ;
ROSE Proximal CASS4 ; CSTF1 ; AURKA ; C20orf43 ;
ROSE Closest CASS4 ;
Lasso AURKA ; CASS4 ; CSTF1 ; RTFDC1 ;
PreSTIGE AURKA ; CASS4 ; FA210B ;
ABC ;
BETA RTFDC1 ; AURKA ; CSTF1 ; CASS4 ; GCNT7 ; FAM210B ; FAM209A ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900385 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers