SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003900381
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr1:145992538-145998545
Size: 6007
Super-enhancer rank 381
Number of SE elements: 1
ChIP density(Case|Control): 31271.985|1472.472
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TXNIP ;
ROSE Overlap TXNIP ;
ROSE Proximal LIX1L ; HFE2 ; ANKRD34A ; POLR3GL ;
ROSE Closest TXNIP ;
Lasso ;
PreSTIGE ;
ABC ;
BETA GNRHR2 ; RBM8A ; POLR3GL ; LIX1L ; ITGA10 ; TXNIP ; RNVU1-6 ; HFE2 ; PEX11B ; LOC101928979 ; ANKRD34A ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900381 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers