SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900379
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr1:42815755-42831577
Size: 15822
Super-enhancer rank 379
Number of SE elements: 3
ChIP density(Case|Control): 33026.8428|3183.3864
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ERMAP ;
ROSE Overlap ERMAP ; CCDC23 ;
ROSE Proximal C1orf50 ; LEPRE1 ; ZNF691 ;
ROSE Closest ERMAP ;
Lasso CCDC23 ; ERAP ; LEPRE1 ; ZNF691 ;
PreSTIGE C1orf50 ; CCDC23 ; ERAP ; LEPRE1 ; ZNF691 ;
ABC ;
BETA P3H1 ; CLDN19 ; C1orf50 ; CCDC23 ; ERMAP ; ZNF691 ; LOC100129924 ; LOC339539 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900379 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers