SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900377
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr17:7578721-7588766
Size: 10045
Super-enhancer rank 377
Number of SE elements: 3
ChIP density(Case|Control): 31185.707|1070.797
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MPDU1 ;
ROSE Overlap CD68 ; MPDU1 ; EIF4A1 ; SOX15 ;
ROSE Proximal SNORD10 ; TNFSF13 ; SENP3 ; TNFSF12-TNFSF13 ; FXR2 ; MPDU1 ; SAT2 ; SHBG ; SNORA67 ; SNORA48 ;
ROSE Closest MPDU1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SHBG ; ZBTB4 ; MPDU1 ; FXR2 ; TNFSF13 ; CD68 ; EIF4A1 ; TP53 ; ATP1B2 ; TNFSF12 ; POLR2A ; SENP3-EIF4A1 ; SNORA67 ; SOX15 ; TNFSF12-TNFSF13 ; SNORD10 ; SENP3 ; SNORA48 ; SAT2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900377 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers