SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900373
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr11:57395507-57433243
Size: 37736
Super-enhancer rank 373
Number of SE elements: 8
ChIP density(Case|Control): 34868.064|4649.0752
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC43A3 ;
ROSE Overlap SLC43A3 ;
ROSE Proximal RTN4RL2 ; PRG2 ; PRG3 ;
ROSE Closest SLC43A3 ;
Lasso PRG2 ; PRG3 ; RP11-872D17.8 ; RTN4RL2 ; SLC43A3 ; SSRP1 ;
PreSTIGE PRG2 ; SLC43A3 ;
ABC YPEL4 ; CLP1 ;
BETA PRG2 ; PRG3 ; SLC43A3 ; P2RX3 ; TNKS1BP1 ; SSRP1 ; RTN4RL2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900373 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers