SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900372
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr12:93370706-93395045
Size: 24339
Super-enhancer rank 372
Number of SE elements: 5
ChIP density(Case|Control): 33286.0164|3037.5072
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NUDT4P1 ;
ROSE Overlap NUDT4 ; NUDT4P1 ;
ROSE Proximal NUDT4 ; UBE2N ;
ROSE Closest NUDT4P1 ;
Lasso NUDT4 ; UBE2N ;
PreSTIGE LOC643339 ; RPL42 ; NUDT4 ; NUDT4P1 ; UBE2N ;
ABC ;
BETA MRPL42 ; NUDT4 ; LOC643339 ; UBE2N ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900372 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers