SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900361
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr11:205932-223534
Size: 17602
Super-enhancer rank 361
Number of SE elements: 6
ChIP density(Case|Control): 32781.9648|2091.1176
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RIC8A ;
ROSE Overlap BET1L ; RIC8A ; SIRT3 ;
ROSE Proximal SCGB1C1 ; ODF3 ; SIRT3 ; PSMD13 ; BET1L ;
ROSE Closest RIC8A ;
Lasso BET1L ; NLRP6 ; ODF3 ; PSD13 ; RIC8A ; SCGB1C1 ; SIRT3 ;
PreSTIGE ATHL1 ; BET1L ; IFIT1 ; IFIT2 ; PSD13 ; SIRT3 ;
ABC BET1L ; ODF3 ; RIC8A ; SIRT3 ; PSMD13 ;
BETA RIC8A ; BET1L ; ODF3 ; PSMD13 ; IFITM1 ; SCGB1C1 ; SIRT3 ; NLRP6 ; ATHL1 ; LINC01001 ; IFITM5 ; MIR6743 ; IFITM2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900361 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers