SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900354
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr5:163458594-163463343
Size: 4749
Super-enhancer rank 354
Number of SE elements: 1
ChIP density(Case|Control): 31536.6843|681.0066
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HMMR ;
ROSE Overlap NUDCD2 ; HMMR ;
ROSE Proximal CCNG1 ; MAT2B ;
ROSE Closest HMMR ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MAT2B ; CCNG1 ; HMMR ; NUDCD2 ; HMMR-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900354 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers